BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G04SP1|AL428603
(791 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1198 1191 0.0
>3x_Contig1198
Length = 5263
Score = 1191 bits (599), Expect = 0.0
Identities = 615/619 (99%), Gaps = 2/619 (0%)
Strand = Plus / Plus
Query: 1 gatcccatttgtttctttttgctcatcagtcgaggaattcgaaaattttcaaaaattgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4622 gatcccatttgtttctttttgctcatcagtcgaggaattcgaaaattttcaaaaattgaa 4681
Query: 61 aaactaaagaaaatgatttcaagagactaacctcatctcatctcgttccatctcatctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4682 aaactaaagaaaatgatttcaagagactaacctcatctcatctcgttccatctcatctca 4741
Query: 121 ctttatgataaaactttttttagacttggacttgatccgatcttatttctagtcttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4742 ctttatgataaaactttttttagacttggacttgatccgatcttatttctagtcttaaaa 4801
Query: 181 caccagattcaagcgagcttttcattcttgcaaggaacttgaactgacccaatcggatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4802 caccagattcaagcgagcttttcattcttgcaaggaacttgaactgacccaatcggatac 4861
Query: 241 ttcacttcatattataaagamataatgtctgctccaaacccaaaggctttcccattggct 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 4862 ttcacttcatattataaagaaataatgtctgctccaaacccaaaggctttcccattggct 4921
Query: 301 gatgccaccttgtcccaacaaatcttggatgttgttcaacaagcttccaacatgagacaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4922 gatgccaccttgtcccaacaaatcttggatgttgttcaacaagcttccaacatgagacaa 4981
Query: 361 ttgaagaagggtgctaacgaagctaccaagactttgaaccgtggtatttccgaattcatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4982 ttgaagaagggtgctaacgaagctaccaagactttgaaccgtggtatttccgaattcatt 5041
Query: 421 atcatggctgctgactgtgaacctattgamatcttgttgcacttgccattgttgtgtgaa 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5042 atcatggctgctgactgtgaacctattgaaatcttgttgcacttgccattgttgtgtgaa 5101
Query: 481 gataagaacgttccatacgtctttgcttccatccagaactgctttgggtagagcttgtgg 540
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 5102 gataagaacgttccatacgtctttg-ttccatccagaactgctttgggtagagcttgtgg 5160
Query: 541 tgtttccagaccagttattgctgcttctattaccactaacgatgcttctgctatcaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5161 tgtttccagaccagttattgctgcttctattaccactaacgatgcttctgctatcaaaag 5220
Query: 601 ccaaatctatgccgttaag 619
|||||||| ||||||||||
Sbjct: 5221 ccaaatct-tgccgttaag 5238
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7885
Number of Sequences: 1807
Number of extensions: 7885
Number of successful extensions: 93
Number of sequences better than 1.0e-20: 1
length of query: 791
length of database: 10,358,551
effective HSP length: 16
effective length of query: 775
effective length of database: 10,329,639
effective search space: 8005470225
effective search space used: 8005470225
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)